Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
USB1Q9BQ65 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
USB1Q9BQ65 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 RPSAP43-201ENST00000402237 625 ntBASIC14.95□□□□□ -0.02
USB1Q9BQ65 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 AC005829.1-201ENST00000570002 483 ntBASIC14.95□□□□□ -0.02
USB1Q9BQ65 AL158211.2-201ENST00000607282 395 ntBASIC14.95□□□□□ -0.02
USB1Q9BQ65 C20orf181-201ENST00000623918 480 ntBASIC14.95□□□□□ -0.02
USB1Q9BQ65 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
USB1Q9BQ65 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
USB1Q9BQ65 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.94□□□□□ -0.02
USB1Q9BQ65 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PDPK2P-202ENST00000562415 1191 ntBASIC14.94□□□□□ -0.02
USB1Q9BQ65 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 OR7E47P-204ENST00000575924 449 ntBASIC14.94□□□□□ -0.02
USB1Q9BQ65 AC079791.1-201ENST00000605356 973 ntBASIC14.94□□□□□ -0.02
USB1Q9BQ65 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 AL645728.2-201ENST00000641974 660 ntBASIC14.94□□□□□ -0.02
USB1Q9BQ65 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 AL355312.1-201ENST00000407115 2176 ntBASIC14.94□□□□□ -0.02
USB1Q9BQ65 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
USB1Q9BQ65 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
USB1Q9BQ65 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
USB1Q9BQ65 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
USB1Q9BQ65 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms