Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
RAX2Q96IS3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13□□□□□ -0.33
RAX2Q96IS3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RAX2Q96IS3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 AC012569.1-201ENST00000591191 1524 ntBASIC13□□□□□ -0.33
RAX2Q96IS3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 AL353732.1-201ENST00000569618 1459 ntBASIC13□□□□□ -0.33
RAX2Q96IS3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 STOM-202ENST00000347359 870 ntTSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13□□□□□ -0.33
RAX2Q96IS3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13□□□□□ -0.33
RAX2Q96IS3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13□□□□□ -0.33
RAX2Q96IS3 AC027796.2-201ENST00000575326 344 ntBASIC13□□□□□ -0.33
RAX2Q96IS3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13□□□□□ -0.33
RAX2Q96IS3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13□□□□□ -0.33
RAX2Q96IS3 AL513210.1-201ENST00000629608 234 ntBASIC13□□□□□ -0.33
RAX2Q96IS3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13□□□□□ -0.33
RAX2Q96IS3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13□□□□□ -0.33
RAX2Q96IS3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAX2Q96IS3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 HMGA1P7-201ENST00000406908 502 ntBASIC12.99□□□□□ -0.33
RAX2Q96IS3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAX2Q96IS3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 AC004835.2-201ENST00000603762 682 ntBASIC12.99□□□□□ -0.33
RAX2Q96IS3 AC027612.4-201ENST00000605371 583 ntBASIC12.99□□□□□ -0.33
RAX2Q96IS3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.99□□□□□ -0.33
RAX2Q96IS3 AC105339.1-204ENST00000636249 355 ntBASIC12.99□□□□□ -0.33
RAX2Q96IS3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms