Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 AC004449.1-201ENST00000564240 433 ntBASIC17.85■□□□□ 0.45
BEST2Q8NFU1 AL138918.1-201ENST00000568306 659 ntBASIC17.85■□□□□ 0.45
BEST2Q8NFU1 AP000842.3-202ENST00000569238 1080 ntBASIC17.85■□□□□ 0.45
BEST2Q8NFU1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 RNF216P1-203ENST00000404404 2427 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AC080080.1-201ENST00000625121 2420 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AL031731.1-201ENST00000642131 2094 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 FAM58DP-201ENST00000428076 619 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 PRYP6-201ENST00000514804 343 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AC105233.2-201ENST00000523697 349 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AF228730.5-201ENST00000530288 346 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AC093028.1-201ENST00000622998 982 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 LINC00628-201ENST00000628516 1289 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AC084121.4-201ENST00000641598 221 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AF228730.8-201ENST00000642140 221 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST2Q8NFU1 GPAA1P2-202ENST00000606848 1787 ntBASIC17.84■□□□□ 0.45
BEST2Q8NFU1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BEST2Q8NFU1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST2Q8NFU1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST2Q8NFU1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
BEST2Q8NFU1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST2Q8NFU1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST2Q8NFU1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST2Q8NFU1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 MIR346-201ENST00000362234 95 ntBASIC17.83■□□□□ 0.44
BEST2Q8NFU1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 AC073389.1-201ENST00000595595 795 ntBASIC17.83■□□□□ 0.44
BEST2Q8NFU1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BEST2Q8NFU1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms