Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 AC008267.7-201ENST00000624570 1194 ntBASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 LINC01144-201ENST00000626198 1710 ntBASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAM1L1Q8N609 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 AC004461.1-201ENST00000412461 403 ntBASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 SPCS2P4-201ENST00000436160 681 ntBASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 DNAJB3-202ENST00000449667 1266 ntBASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 KRT8P23-201ENST00000560090 1207 ntBASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 AC004835.2-201ENST00000603762 682 ntBASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 AC009053.2-201ENST00000563701 2365 ntBASIC16.4■□□□□ 0.22
TRAM1L1Q8N609 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRAM1L1Q8N609 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
TRAM1L1Q8N609 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 RPS8P6-201ENST00000426177 609 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 CNN2P11-201ENST00000429351 262 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AL592309.1-201ENST00000443127 649 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 PRYP6-201ENST00000514804 343 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 IGHV3-62-201ENST00000520057 340 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 LINC01225-203ENST00000563550 1244 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 SNHG9-202ENST00000564014 471 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AC027307.2-201ENST00000591252 911 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AC073389.1-201ENST00000595595 795 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 AC092171.3-201ENST00000610122 2651 ntBASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms