Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC148477.5-201ENST00000625164 1645 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC003669.1-201ENST00000334569 611 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC073621.1-201ENST00000392730 636 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC005104.2-201ENST00000427818 678 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 DNAJB3-201ENST00000446806 729 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC002347.1-201ENST00000569543 541 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 AL049757.1-201ENST00000616842 1596 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SCXQ7RTU7 PCDHA14-201ENST00000506751 2298 ntBASIC11.1□□□□□ -0.63
SCXQ7RTU7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCXQ7RTU7 NCF1C-201ENST00000438382 1427 ntBASIC11.09□□□□□ -0.63
SCXQ7RTU7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.09□□□□□ -0.63
SCXQ7RTU7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCXQ7RTU7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms