Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AC023824.1-201ENST00000562945 2975 ntBASIC16.8■□□□□ 0.28
RAPH1Q70E73 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAPH1Q70E73 AC105917.1-201ENST00000506637 2539 ntBASIC16.79■□□□□ 0.28
RAPH1Q70E73 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 TERC-201ENST00000602385 541 ntBASIC16.79■□□□□ 0.28
RAPH1Q70E73 AC064862.7-201ENST00000604520 867 ntBASIC16.79■□□□□ 0.28
RAPH1Q70E73 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 AL513523.2-202ENST00000427283 2040 ntBASIC16.79■□□□□ 0.28
RAPH1Q70E73 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.79■□□□□ 0.28
RAPH1Q70E73 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAPH1Q70E73 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 PRYP5-201ENST00000451909 266 ntBASIC16.78■□□□□ 0.28
RAPH1Q70E73 KRT18P35-201ENST00000510488 1269 ntBASIC16.78■□□□□ 0.28
RAPH1Q70E73 FOSL1P1-201ENST00000511041 816 ntBASIC16.78■□□□□ 0.28
RAPH1Q70E73 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.78■□□□□ 0.28
RAPH1Q70E73 AL022326.1-202ENST00000641533 845 ntBASIC16.78■□□□□ 0.28
RAPH1Q70E73 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.78■□□□□ 0.28
RAPH1Q70E73 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAPH1Q70E73 AC006277.1-201ENST00000624348 1610 ntBASIC16.78■□□□□ 0.28
RAPH1Q70E73 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAPH1Q70E73 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAPH1Q70E73 TSPY26P-202ENST00000565928 3884 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms