Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD4Q5XG99 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 AC004461.2-201ENST00000629517 803 ntBASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.18■□□□□ 0.18
LYSMD4Q5XG99 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AC008764.6-201ENST00000595909 2069 ntBASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AC093724.1-201ENST00000448659 1027 ntBASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AC022210.1-201ENST00000449856 793 ntBASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AC123567.1-201ENST00000548294 1261 ntBASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AC099568.2-201ENST00000609194 695 ntBASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 MIR6069-201ENST00000620069 79 ntBASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD4Q5XG99 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 SNX33P1-201ENST00000592116 1762 ntBASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms