Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AL031731.1-201ENST00000642131 2094 ntBASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC00242Q5T6M2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SIGLEC16-201ENST00000599858 1437 ntBASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 TOP3BP1-201ENST00000420768 1380 ntBASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00242Q5T6M2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.4□□□□□ -0.58
LINC00242Q5T6M2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms