Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 AC005225.4-201ENST00000557330 545 ntBASIC17.56■□□□□ 0.4
VARS2Q5ST30 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 FAM220BP-201ENST00000377689 816 ntBASIC17.55■□□□□ 0.4
VARS2Q5ST30 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 UGT1A2P-201ENST00000454886 866 ntBASIC17.55■□□□□ 0.4
VARS2Q5ST30 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 AC007967.4-201ENST00000614700 386 ntBASIC17.55■□□□□ 0.4
VARS2Q5ST30 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARS2Q5ST30 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.55■□□□□ 0.4
VARS2Q5ST30 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.54■□□□□ 0.4
VARS2Q5ST30 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 AC098859.1-201ENST00000502915 1238 ntBASIC17.54■□□□□ 0.4
VARS2Q5ST30 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.54■□□□□ 0.4
VARS2Q5ST30 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARS2Q5ST30 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VARS2Q5ST30 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.53■□□□□ 0.4
VARS2Q5ST30 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARS2Q5ST30 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms