Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF144AP50876 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF144AP50876 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
RNF144AP50876 PMS2P1-201ENST00000431037 1228 ntBASIC15.53■□□□□ 0.08
RNF144AP50876 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
RNF144AP50876 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.53■□□□□ 0.08
RNF144AP50876 AC107918.2-201ENST00000530817 355 ntBASIC15.53■□□□□ 0.08
RNF144AP50876 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 AP001005.1-201ENST00000571755 1248 ntBASIC15.53■□□□□ 0.08
RNF144AP50876 MIR4751-201ENST00000578027 74 ntBASIC15.53■□□□□ 0.08
RNF144AP50876 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF144AP50876 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF144AP50876 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF144AP50876 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF144AP50876 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF144AP50876 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF144AP50876 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
RNF144AP50876 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 HLA-A-201ENST00000376802 1334 ntBASIC15.52■□□□□ 0.08
RNF144AP50876 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF144AP50876 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RNF144AP50876 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF144AP50876 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RNF144AP50876 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.52■□□□□ 0.08
RNF144AP50876 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.52■□□□□ 0.08
RNF144AP50876 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RNF144AP50876 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.52■□□□□ 0.08
RNF144AP50876 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF144AP50876 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RNF144AP50876 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF144AP50876 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.52■□□□□ 0.07
RNF144AP50876 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.52■□□□□ 0.07
RNF144AP50876 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF144AP50876 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF144AP50876 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RNF144AP50876 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.52■□□□□ 0.07
RNF144AP50876 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 SLC22A20-204ENST00000530038 1673 ntBASIC15.51■□□□□ 0.07
RNF144AP50876 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF144AP50876 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RNF144AP50876 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF144AP50876 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF144AP50876 AC108751.1-201ENST00000490852 363 ntBASIC15.51■□□□□ 0.07
RNF144AP50876 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.51■□□□□ 0.07
RNF144AP50876 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms