Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
UBE2AP49459 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2AP49459 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC10.61□□□□□ -0.71
UBE2AP49459 TUBB8P12-201ENST00000308911 1335 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 TUBB7P-202ENST00000428444 1305 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2AP49459 TUBB8P7-204ENST00000567960 1332 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 PMPCAP1-201ENST00000508114 1576 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.61□□□□□ -0.71
UBE2AP49459 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 SPDYE21P-201ENST00000413323 827 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 ACTG1P4-201ENST00000425123 1122 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 FOSL1P1-201ENST00000511041 816 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2AP49459 MIR3180-1-201ENST00000580374 94 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 MIR3180-3-201ENST00000584616 94 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 AL121772.3-201ENST00000610840 674 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 NPAP1P7-201ENST00000613027 823 ntBASIC10.61□□□□□ -0.71
UBE2AP49459 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.61□□□□□ -0.71
UBE2AP49459 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC10.61□□□□□ -0.71
UBE2AP49459 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2AP49459 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2AP49459 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2AP49459 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
UBE2AP49459 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
UBE2AP49459 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
UBE2AP49459 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.6□□□□□ -0.71
UBE2AP49459 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC10.6□□□□□ -0.71
UBE2AP49459 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
UBE2AP49459 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2AP49459 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms