Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 HYMAI-201ENST00000635591 3347 ntBASIC15.3■□□□□ 0.04
SHC1P29353 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SHC1P29353 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC1P29353 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SHC1P29353 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.29■□□□□ 0.04
SHC1P29353 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 ZNF259P1-201ENST00000407656 1365 ntBASIC15.29■□□□□ 0.04
SHC1P29353 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 MIR940-201ENST00000401276 94 ntBASIC15.29■□□□□ 0.04
SHC1P29353 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 PRSS29P-201ENST00000440800 595 ntBASIC15.29■□□□□ 0.04
SHC1P29353 KRT18P2-201ENST00000447938 1258 ntBASIC15.29■□□□□ 0.04
SHC1P29353 HCG4B-203ENST00000450128 991 ntBASIC15.29■□□□□ 0.04
SHC1P29353 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.29■□□□□ 0.04
SHC1P29353 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 AC064836.3-201ENST00000607928 673 ntBASIC15.29■□□□□ 0.04
SHC1P29353 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.29■□□□□ 0.04
SHC1P29353 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.29■□□□□ 0.04
SHC1P29353 CYP2T1P-202ENST00000641596 2535 ntBASIC15.29■□□□□ 0.04
SHC1P29353 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.29■□□□□ 0.04
SHC1P29353 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.29■□□□□ 0.04
SHC1P29353 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
SHC1P29353 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC1P29353 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 MIR574-201ENST00000385209 96 ntBASIC15.28■□□□□ 0.04
SHC1P29353 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.28■□□□□ 0.04
SHC1P29353 CRYGEP-201ENST00000412192 528 ntBASIC15.28■□□□□ 0.04
SHC1P29353 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.28■□□□□ 0.04
SHC1P29353 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.28■□□□□ 0.04
SHC1P29353 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
SHC1P29353 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHC1P29353 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.28■□□□□ 0.04
SHC1P29353 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms