Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN1P18031 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 AD000864.1-201ENST00000624076 2295 ntBASIC17.6■□□□□ 0.41
PTPN1P18031 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN1P18031 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN1P18031 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN1P18031 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 HLA-A-202ENST00000376806 1854 ntBASIC17.59■□□□□ 0.41
PTPN1P18031 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PTPN1P18031 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.59■□□□□ 0.41
PTPN1P18031 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 KRT18P28-201ENST00000453838 1332 ntBASIC17.59■□□□□ 0.41
PTPN1P18031 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN1P18031 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN1P18031 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN1P18031 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN1P18031 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PTPN1P18031 KRT8P23-201ENST00000560090 1207 ntBASIC17.59■□□□□ 0.41
PTPN1P18031 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN1P18031 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.59■□□□□ 0.41
PTPN1P18031 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
PTPN1P18031 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PTPN1P18031 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN1P18031 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN1P18031 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
PTPN1P18031 GPAA1P2-202ENST00000606848 1787 ntBASIC17.58■□□□□ 0.41
PTPN1P18031 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.58■□□□□ 0.41
PTPN1P18031 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
PTPN1P18031 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN1P18031 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN1P18031 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.58■□□□□ 0.4
PTPN1P18031 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
PTPN1P18031 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN1P18031 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN1P18031 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN1P18031 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN1P18031 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN1P18031 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN1P18031 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN1P18031 GGT4P-201ENST00000623672 1708 ntBASIC17.58■□□□□ 0.4
PTPN1P18031 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN1P18031 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN1P18031 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 UXT-AS1-201ENST00000590504 1525 ntBASIC17.57■□□□□ 0.4
PTPN1P18031 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN1P18031 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN1P18031 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
PTPN1P18031 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PTPN1P18031 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.57■□□□□ 0.4
PTPN1P18031 FAM58DP-201ENST00000428076 619 ntBASIC17.57■□□□□ 0.4
PTPN1P18031 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN1P18031 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 AC023141.5-201ENST00000458585 616 ntBASIC17.57■□□□□ 0.4
PTPN1P18031 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.57■□□□□ 0.4
PTPN1P18031 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN1P18031 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.57■□□□□ 0.4
PTPN1P18031 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN1P18031 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN1P18031 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms