Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 AC243591.1-201ENST00000452967 1364 ntBASIC13.87□□□□□ -0.19
CTSDP07339 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 AC148477.5-201ENST00000625164 1645 ntBASIC13.87□□□□□ -0.19
CTSDP07339 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 SNX33P1-201ENST00000592116 1762 ntBASIC13.87□□□□□ -0.19
CTSDP07339 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 AC104076.2-201ENST00000448912 469 ntBASIC13.87□□□□□ -0.19
CTSDP07339 AC092647.4-201ENST00000457211 535 ntBASIC13.87□□□□□ -0.19
CTSDP07339 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 VENTXP7-201ENST00000475503 772 ntBASIC13.87□□□□□ -0.19
CTSDP07339 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.87□□□□□ -0.19
CTSDP07339 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.87□□□□□ -0.19
CTSDP07339 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.87□□□□□ -0.19
CTSDP07339 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 TERC-201ENST00000602385 541 ntBASIC13.87□□□□□ -0.19
CTSDP07339 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.87□□□□□ -0.19
CTSDP07339 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSDP07339 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSDP07339 AL512652.2-201ENST00000625156 1716 ntBASIC13.87□□□□□ -0.19
CTSDP07339 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSDP07339 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 AL031731.1-201ENST00000642131 2094 ntBASIC13.86□□□□□ -0.19
CTSDP07339 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.86□□□□□ -0.19
CTSDP07339 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSDP07339 AL645929.1-201ENST00000420084 975 ntBASIC13.86□□□□□ -0.19
CTSDP07339 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CTSDP07339 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSDP07339 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.86□□□□□ -0.19
CTSDP07339 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CTSDP07339 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CTSDP07339 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 CDC14C-201ENST00000428251 1719 ntBASIC13.86□□□□□ -0.19
CTSDP07339 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSDP07339 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CTSDP07339 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSDP07339 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms