Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.53□□□□□ -0.08
UPK1BO75841 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UPK1BO75841 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.52□□□□□ -0.08
UPK1BO75841 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
UPK1BO75841 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
UPK1BO75841 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
UPK1BO75841 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.52□□□□□ -0.08
UPK1BO75841 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.52□□□□□ -0.08
UPK1BO75841 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.52□□□□□ -0.08
UPK1BO75841 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.52□□□□□ -0.09
UPK1BO75841 PVRIG2P-201ENST00000435460 978 ntBASIC14.52□□□□□ -0.09
UPK1BO75841 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.52□□□□□ -0.09
UPK1BO75841 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 SLC25A1P4-201ENST00000567977 778 ntBASIC14.52□□□□□ -0.09
UPK1BO75841 AC109462.3-201ENST00000573934 613 ntBASIC14.52□□□□□ -0.09
UPK1BO75841 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
UPK1BO75841 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
UPK1BO75841 AC087481.3-201ENST00000602886 1894 ntBASIC14.52□□□□□ -0.09
UPK1BO75841 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.52□□□□□ -0.09
UPK1BO75841 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
UPK1BO75841 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1BO75841 AC007686.3-201ENST00000619017 3487 ntBASIC14.51□□□□□ -0.09
UPK1BO75841 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 AL359183.1-201ENST00000623796 2132 ntBASIC14.51□□□□□ -0.09
UPK1BO75841 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.51□□□□□ -0.09
UPK1BO75841 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 MIR663A-201ENST00000385250 93 ntBASIC14.51□□□□□ -0.09
UPK1BO75841 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.51□□□□□ -0.09
UPK1BO75841 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.51□□□□□ -0.09
UPK1BO75841 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 SEC1P-202ENST00000473944 940 ntBASIC14.51□□□□□ -0.09
UPK1BO75841 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.51□□□□□ -0.09
UPK1BO75841 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 DUX4L17-201ENST00000557360 1267 ntBASIC14.51□□□□□ -0.09
UPK1BO75841 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 AC092919.2-201ENST00000623631 1645 ntBASIC14.51□□□□□ -0.09
UPK1BO75841 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1BO75841 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms