Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GGT4P-201ENST00000623672 1708 ntBASIC13.64□□□□□ -0.23
SSSCA1O60232 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SSSCA1O60232 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 SLC25A3P1-201ENST00000443844 931 ntBASIC13.64□□□□□ -0.23
SSSCA1O60232 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.64□□□□□ -0.23
SSSCA1O60232 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.64□□□□□ -0.23
SSSCA1O60232 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.64□□□□□ -0.23
SSSCA1O60232 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSSCA1O60232 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.64□□□□□ -0.23
SSSCA1O60232 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SSSCA1O60232 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SSSCA1O60232 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.63□□□□□ -0.23
SSSCA1O60232 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SSSCA1O60232 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 PRAL-201ENST00000624952 3286 ntBASIC13.63□□□□□ -0.23
SSSCA1O60232 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
SSSCA1O60232 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SSSCA1O60232 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.63□□□□□ -0.23
SSSCA1O60232 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.63□□□□□ -0.23
SSSCA1O60232 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.63□□□□□ -0.23
SSSCA1O60232 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 AC132938.5-201ENST00000624980 1813 ntBASIC13.63□□□□□ -0.23
SSSCA1O60232 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.63□□□□□ -0.23
SSSCA1O60232 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.63□□□□□ -0.23
SSSCA1O60232 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
SSSCA1O60232 DUX4L17-201ENST00000557360 1267 ntBASIC13.63□□□□□ -0.23
SSSCA1O60232 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.63□□□□□ -0.23
SSSCA1O60232 AL138831.2-201ENST00000606564 490 ntBASIC13.63□□□□□ -0.23
SSSCA1O60232 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.63□□□□□ -0.23
SSSCA1O60232 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.63□□□□□ -0.23
SSSCA1O60232 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.63□□□□□ -0.23
SSSCA1O60232 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SSSCA1O60232 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.63□□□□□ -0.23
SSSCA1O60232 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 GGT3P-204ENST00000453783 1664 ntBASIC13.63□□□□□ -0.23
SSSCA1O60232 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSSCA1O60232 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.62□□□□□ -0.23
SSSCA1O60232 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSSCA1O60232 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.62□□□□□ -0.23
SSSCA1O60232 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms