Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXS1O43638 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
FOXS1O43638 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXS1O43638 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXS1O43638 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXS1O43638 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXS1O43638 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXS1O43638 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXS1O43638 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXS1O43638 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXS1O43638 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXS1O43638 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 LINC00628-201ENST00000628516 1289 ntBASIC15.6■□□□□ 0.09
FOXS1O43638 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXS1O43638 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
FOXS1O43638 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXS1O43638 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXS1O43638 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
FOXS1O43638 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
FOXS1O43638 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXS1O43638 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
FOXS1O43638 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
FOXS1O43638 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
FOXS1O43638 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXS1O43638 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXS1O43638 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 RBPMS2P1-201ENST00000437762 623 ntBASIC15.59■□□□□ 0.09
FOXS1O43638 AC093724.1-201ENST00000448659 1027 ntBASIC15.59■□□□□ 0.09
FOXS1O43638 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
FOXS1O43638 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXS1O43638 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXS1O43638 AC093028.1-201ENST00000622998 982 ntBASIC15.59■□□□□ 0.09
FOXS1O43638 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXS1O43638 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 AC099398.1-201ENST00000567919 2776 ntBASIC15.59■□□□□ 0.09
FOXS1O43638 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
FOXS1O43638 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXS1O43638 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXS1O43638 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXS1O43638 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.58■□□□□ 0.09
FOXS1O43638 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.58■□□□□ 0.09
FOXS1O43638 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXS1O43638 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXS1O43638 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
FOXS1O43638 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXS1O43638 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXS1O43638 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXS1O43638 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXS1O43638 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
FOXS1O43638 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXS1O43638 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
FOXS1O43638 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
FOXS1O43638 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXS1O43638 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXS1O43638 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.58■□□□□ 0.08
FOXS1O43638 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms