Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 AL009178.2-201ENST00000597278 2719 ntBASIC14.53□□□□□ -0.08
SHISA3A0PJX4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHISA3A0PJX4 SNX18-202ENST00000343017 3140 ntBASIC14.52□□□□□ -0.08
SHISA3A0PJX4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.52□□□□□ -0.08
SHISA3A0PJX4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.52□□□□□ -0.08
SHISA3A0PJX4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 AC073508.3-201ENST00000619697 1419 ntBASIC14.52□□□□□ -0.08
SHISA3A0PJX4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 AL590787.1-201ENST00000568856 1315 ntBASIC14.52□□□□□ -0.08
SHISA3A0PJX4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SHISA3A0PJX4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 SPDYE21P-201ENST00000413323 827 ntBASIC14.52□□□□□ -0.09
SHISA3A0PJX4 AC246785.2-201ENST00000432512 513 ntBASIC14.52□□□□□ -0.09
SHISA3A0PJX4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 CICP24-201ENST00000605464 2705 ntBASIC14.52□□□□□ -0.09
SHISA3A0PJX4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.52□□□□□ -0.09
SHISA3A0PJX4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SHISA3A0PJX4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 TP73-AS1-210ENST00000637775 1455 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 TOP3BP1-201ENST00000420768 1380 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 INTS4P1-201ENST00000438455 1935 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 TERF1P1-201ENST00000311003 1181 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 AL645929.1-201ENST00000420084 975 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 POU5F1P6-201ENST00000466990 990 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms