Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 FLJ16779-201ENST00000612722 7638 ntBASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 FAM220CP-201ENST00000395253 831 ntBASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 AC092597.1-201ENST00000487352 616 ntBASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 GUSBP12-201ENST00000513727 720 ntBASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGB1Q9Y5G3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 STK19B-204ENST00000512515 211 ntBASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 CLEC4GP1-201ENST00000596555 870 ntBASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AC125634.1-201ENST00000438758 1403 ntBASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AL135999.2-201ENST00000622438 1686 ntBASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 AC023157.3-201ENST00000619086 2088 ntBASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGB1Q9Y5G3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms