Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.67■□□□□ 0.1
IFT52Q9Y366 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 HCG4P8-203ENST00000443049 980 ntBASIC15.67■□□□□ 0.1
IFT52Q9Y366 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 AC139887.3-201ENST00000568585 713 ntBASIC15.67■□□□□ 0.1
IFT52Q9Y366 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT52Q9Y366 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.67■□□□□ 0.1
IFT52Q9Y366 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 SCARNA2-201ENST00000458748 420 ntBASIC15.66■□□□□ 0.1
IFT52Q9Y366 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 AC091304.2-201ENST00000564639 760 ntBASIC15.66■□□□□ 0.1
IFT52Q9Y366 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 LINC01711-201ENST00000598340 967 ntBASIC15.66■□□□□ 0.1
IFT52Q9Y366 AC013467.2-201ENST00000605472 835 ntBASIC15.66■□□□□ 0.1
IFT52Q9Y366 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 AL139011.1-202ENST00000642063 584 ntBASIC15.66■□□□□ 0.1
IFT52Q9Y366 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.66■□□□□ 0.1
IFT52Q9Y366 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IFT52Q9Y366 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.65■□□□□ 0.1
IFT52Q9Y366 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IFT52Q9Y366 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.64■□□□□ 0.1
IFT52Q9Y366 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
IFT52Q9Y366 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IFT52Q9Y366 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.64■□□□□ 0.09
IFT52Q9Y366 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.64■□□□□ 0.09
IFT52Q9Y366 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms