Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 AC063926.3-201ENST00000624734 5658 ntBASIC15.46■□□□□ 0.06
POLR2J3Q9H1A7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 AC139887.3-201ENST00000568585 713 ntBASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 NKAPP1-205ENST00000585790 367 ntBASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 AL365203.3-201ENST00000609742 2057 ntBASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
POLR2J3Q9H1A7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 AC005052.1-201ENST00000625181 2492 ntBASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 AC105917.1-201ENST00000506637 2539 ntBASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 AC091167.2-201ENST00000579581 588 ntBASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 AC064862.7-201ENST00000604520 867 ntBASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
POLR2J3Q9H1A7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms