Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 RNU1-129P-201ENST00000384064 167 ntBASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 U1.21-201ENST00000580816 167 ntBASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 MIR6775-201ENST00000617557 69 ntBASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 OR6D1P-202ENST00000641007 5290 ntBASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 AL023806.1-201ENST00000603994 1649 ntBASIC18.31■□□□□ 0.52
UBE2OQ9C0C9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 RPL37AP1-201ENST00000412502 279 ntBASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 ACTBP11-201ENST00000436287 1126 ntBASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 DOC2GP-202ENST00000514950 1163 ntBASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 AC105233.2-201ENST00000523697 349 ntBASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 AF228730.5-201ENST00000530288 346 ntBASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2OQ9C0C9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 AL353732.1-201ENST00000569618 1459 ntBASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 AL353705.2-201ENST00000428243 662 ntBASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 AL109936.8-201ENST00000641772 604 ntBASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2OQ9C0C9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms