Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDHD3Q9BSH5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AP005117.1-201ENST00000584346 1413 ntBASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AL512652.2-201ENST00000625156 1716 ntBASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AL139011.1-202ENST00000642063 584 ntBASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HDHD3Q9BSH5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 AC132008.2-207ENST00000454517 770 ntBASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 AL031731.1-201ENST00000642131 2094 ntBASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDHD3Q9BSH5 TOP3BP1-201ENST00000420768 1380 ntBASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 NCF1C-201ENST00000438382 1427 ntBASIC14.09□□□□□ -0.15
HDHD3Q9BSH5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms