Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.71■■□□□ 1.07
ABCA3Q99758 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ABCA3Q99758 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ABCA3Q99758 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.71■■□□□ 1.07
ABCA3Q99758 RPL13P2-201ENST00000440687 659 ntBASIC21.71■■□□□ 1.07
ABCA3Q99758 RPL13AP20-201ENST00000459725 609 ntBASIC21.71■■□□□ 1.07
ABCA3Q99758 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.71■■□□□ 1.07
ABCA3Q99758 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.71■■□□□ 1.07
ABCA3Q99758 RN7SL560P-201ENST00000577943 264 ntBASIC21.71■■□□□ 1.07
ABCA3Q99758 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.71■■□□□ 1.07
ABCA3Q99758 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ABCA3Q99758 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ABCA3Q99758 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.7■■□□□ 1.07
ABCA3Q99758 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ABCA3Q99758 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.7■■□□□ 1.06
ABCA3Q99758 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.7■■□□□ 1.06
ABCA3Q99758 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.7■■□□□ 1.06
ABCA3Q99758 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.7■■□□□ 1.06
ABCA3Q99758 ACTG1P3-201ENST00000431775 1114 ntBASIC21.7■■□□□ 1.06
ABCA3Q99758 AC012441.1-201ENST00000446669 685 ntBASIC21.7■■□□□ 1.06
ABCA3Q99758 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.7■■□□□ 1.06
ABCA3Q99758 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC21.7■■□□□ 1.06
ABCA3Q99758 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.7■■□□□ 1.06
ABCA3Q99758 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.7■■□□□ 1.06
ABCA3Q99758 PTP4A1P2-201ENST00000546033 454 ntBASIC21.7■■□□□ 1.06
ABCA3Q99758 AC120045.2-201ENST00000567334 178 ntBASIC21.7■■□□□ 1.06
ABCA3Q99758 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ABCA3Q99758 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.7■■□□□ 1.06
ABCA3Q99758 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.7■■□□□ 1.06
ABCA3Q99758 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.7■■□□□ 1.06
ABCA3Q99758 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
ABCA3Q99758 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA3Q99758 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.69■■□□□ 1.06
ABCA3Q99758 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC21.69■■□□□ 1.06
ABCA3Q99758 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.69■■□□□ 1.06
ABCA3Q99758 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC21.69■■□□□ 1.06
ABCA3Q99758 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCA3Q99758 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.69■■□□□ 1.06
ABCA3Q99758 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.69■■□□□ 1.06
ABCA3Q99758 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ABCA3Q99758 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.69■■□□□ 1.06
ABCA3Q99758 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA3Q99758 AC007969.1-201ENST00000433675 447 ntBASIC21.69■■□□□ 1.06
ABCA3Q99758 BCRP2-202ENST00000447763 634 ntBASIC21.69■■□□□ 1.06
ABCA3Q99758 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.69■■□□□ 1.06
ABCA3Q99758 BCRP6-201ENST00000510112 632 ntBASIC21.69■■□□□ 1.06
ABCA3Q99758 BCRP7-201ENST00000511549 544 ntBASIC21.69■■□□□ 1.06
ABCA3Q99758 AP001889.1-201ENST00000525414 633 ntBASIC21.69■■□□□ 1.06
ABCA3Q99758 AL359711.2-201ENST00000563105 872 ntBASIC21.69■■□□□ 1.06
ABCA3Q99758 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.69■■□□□ 1.06
ABCA3Q99758 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.69■■□□□ 1.06
ABCA3Q99758 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ABCA3Q99758 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCA3Q99758 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCA3Q99758 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.68■■□□□ 1.06
ABCA3Q99758 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ABCA3Q99758 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCA3Q99758 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCA3Q99758 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ABCA3Q99758 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ABCA3Q99758 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ABCA3Q99758 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms