Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC85AQ96PX6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 AL158211.3-201ENST00000607385 239 ntBASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 KRT8P39-201ENST00000396270 1433 ntBASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CCDC85AQ96PX6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 AL512638.1-201ENST00000457493 794 ntBASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 AC027369.6-201ENST00000525520 931 ntBASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC85AQ96PX6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 SPDYE12P-201ENST00000618416 771 ntBASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CCDC85AQ96PX6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 AL512652.2-201ENST00000625156 1716 ntBASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 AC005915.1-201ENST00000624912 2018 ntBASIC20.58■□□□□ 0.88
CCDC85AQ96PX6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms