Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.67■□□□□ 0.42
CALR3Q96L12 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.67■□□□□ 0.42
CALR3Q96L12 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.67■□□□□ 0.42
CALR3Q96L12 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.67■□□□□ 0.42
CALR3Q96L12 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CALR3Q96L12 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.67■□□□□ 0.42
CALR3Q96L12 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALR3Q96L12 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CALR3Q96L12 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.66■□□□□ 0.42
CALR3Q96L12 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.66■□□□□ 0.42
CALR3Q96L12 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.66■□□□□ 0.42
CALR3Q96L12 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CALR3Q96L12 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.66■□□□□ 0.42
CALR3Q96L12 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.66■□□□□ 0.42
CALR3Q96L12 AC092119.3-201ENST00000612618 583 ntBASIC17.66■□□□□ 0.42
CALR3Q96L12 AL805961.1-202ENST00000641562 540 ntBASIC17.66■□□□□ 0.42
CALR3Q96L12 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 AC006449.6-201ENST00000612330 2296 ntBASIC17.66■□□□□ 0.42
CALR3Q96L12 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.66■□□□□ 0.42
CALR3Q96L12 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CALR3Q96L12 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CALR3Q96L12 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CALR3Q96L12 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 AL671710.1-201ENST00000610245 2349 ntBASIC17.65■□□□□ 0.42
CALR3Q96L12 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.65■□□□□ 0.42
CALR3Q96L12 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.65■□□□□ 0.42
CALR3Q96L12 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CALR3Q96L12 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.65■□□□□ 0.42
CALR3Q96L12 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 HCG4-201ENST00000418983 998 ntBASIC17.65■□□□□ 0.42
CALR3Q96L12 SCARNA2-201ENST00000458748 420 ntBASIC17.65■□□□□ 0.42
CALR3Q96L12 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CALR3Q96L12 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.65■□□□□ 0.42
CALR3Q96L12 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.65■□□□□ 0.42
CALR3Q96L12 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.65■□□□□ 0.42
CALR3Q96L12 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.65■□□□□ 0.42
CALR3Q96L12 AC005412.3-201ENST00000580309 715 ntBASIC17.65■□□□□ 0.42
CALR3Q96L12 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 AC020765.3-201ENST00000613051 740 ntBASIC17.65■□□□□ 0.42
CALR3Q96L12 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.65■□□□□ 0.42
CALR3Q96L12 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CALR3Q96L12 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.65■□□□□ 0.42
CALR3Q96L12 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CALR3Q96L12 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CALR3Q96L12 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.65■□□□□ 0.42
CALR3Q96L12 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.65■□□□□ 0.42
CALR3Q96L12 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CALR3Q96L12 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CALR3Q96L12 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.64■□□□□ 0.42
CALR3Q96L12 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CALR3Q96L12 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CALR3Q96L12 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.64■□□□□ 0.41
CALR3Q96L12 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.64■□□□□ 0.41
CALR3Q96L12 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.64■□□□□ 0.41
CALR3Q96L12 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CALR3Q96L12 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.64■□□□□ 0.41
CALR3Q96L12 GPAA1P2-202ENST00000606848 1787 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms