Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC104076.2-201ENST00000448912 469 ntBASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC009533.2-201ENST00000543664 586 ntBASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AL590326.2-201ENST00000625139 305 ntBASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 HYMAI.1-201ENST00000620949 238 ntBASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 KRT8P49-201ENST00000604166 1432 ntBASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IL1Q8TBN0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 AL845331.1-201ENST00000424978 1190 ntBASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 AC139887.4-201ENST00000607877 719 ntBASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 AL592071.1-201ENST00000611956 408 ntBASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 GGT3P-204ENST00000453783 1664 ntBASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IL1Q8TBN0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms