Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC10.27□□□□□ -0.77
SVIPQ8NHG7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 KCTD21-AS1-201ENST00000500113 1789 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 NCF2-204ENST00000418089 2168 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 C10orf67-201ENST00000323327 2799 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 BCAR3-204ENST00000370247 2827 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 ZSWIM5P2-201ENST00000420212 2038 ntBASIC10.26□□□□□ -0.77
SVIPQ8NHG7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 AC124283.5-201ENST00000624661 1809 ntBASIC10.26□□□□□ -0.77
SVIPQ8NHG7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 AC018529.2-202ENST00000611482 3087 ntBASIC10.26□□□□□ -0.77
SVIPQ8NHG7 LINC01804-203ENST00000492352 1871 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 EPX-201ENST00000225371 2708 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SVIPQ8NHG7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 AMER3-201ENST00000321420 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 REXO1L1P-201ENST00000379010 6598 ntBASIC10.25□□□□□ -0.77
SVIPQ8NHG7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ZC3H12C-203ENST00000528673 2931 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SVIPQ8NHG7 FTLP10-201ENST00000503647 1501 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms