Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC009947.1-201ENST00000444350 727 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 AL513480.1-201ENST00000451731 511 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 AC079776.4-201ENST00000511039 504 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 RNA5SP419-201ENST00000515908 135 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 RNA5SP415-201ENST00000517246 115 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 SLC25A6P4-201ENST00000586535 553 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 PCGF3-213ENST00000620529 1899 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 MTHFR-217ENST00000641820 1569 ntBASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ZNF440Q8IYI8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 ALOX12P2-203ENST00000570921 1945 ntBASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 PMS2P4-201ENST00000412466 1052 ntBASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 IGHV3-22-201ENST00000520721 359 ntBASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF440Q8IYI8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF440Q8IYI8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms