Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 AC012640.2-201ENST00000561606 901 ntBASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 AL353732.1-201ENST00000569618 1459 ntBASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 AP002414.3-201ENST00000589352 1468 ntBASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 AL139384.1-201ENST00000612143 3047 ntBASIC19.6■□□□□ 0.73
CCDC83Q8IWF9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC83Q8IWF9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 AL596087.1-201ENST00000400979 1969 ntBASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC83Q8IWF9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 FAM197Y8-203ENST00000450145 560 ntBASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 AC008667.4-201ENST00000607370 168 ntBASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 GGTLC5P-201ENST00000617623 998 ntBASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 AC008735.5-201ENST00000623544 497 ntBASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 AC148477.8-201ENST00000624298 468 ntBASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC83Q8IWF9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC83Q8IWF9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms