Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 RCN1P2-201ENST00000398357 915 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 IGHV3-47-201ENST00000425060 335 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 LINC00265-3P-201ENST00000447588 903 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 KRT18P21-201ENST00000515767 1272 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 AP002414.4-201ENST00000589764 1148 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 AC114341.1-201ENST00000618070 349 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 AP000867.4-201ENST00000641616 219 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 LINC00895-201ENST00000629028 1637 ntBASIC15.13■□□□□ 0.01
SHFQ7M4L6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.12■□□□□ 0.01
SHFQ7M4L6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 AP002383.4-201ENST00000442518 975 ntBASIC15.12■□□□□ 0.01
SHFQ7M4L6 AC104819.1-201ENST00000504587 486 ntBASIC15.12■□□□□ 0.01
SHFQ7M4L6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 AL590326.2-201ENST00000625139 305 ntBASIC15.12■□□□□ 0.01
SHFQ7M4L6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SHFQ7M4L6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHFQ7M4L6 IER3-202ENST00000376377 1350 ntBASIC15.11■□□□□ 0.01
SHFQ7M4L6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 AL596087.1-201ENST00000400979 1969 ntBASIC15.11■□□□□ 0.01
SHFQ7M4L6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.11■□□□□ 0.01
SHFQ7M4L6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHFQ7M4L6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms