Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AC060834.1-201ENST00000443027 2032 ntBASIC17.74■□□□□ 0.43
DCLRE1AQ6PJP8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DCLRE1AQ6PJP8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DCLRE1AQ6PJP8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DCLRE1AQ6PJP8 AC073439.1-201ENST00000624121 1774 ntBASIC17.74■□□□□ 0.43
DCLRE1AQ6PJP8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AC009053.2-201ENST00000563701 2365 ntBASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 INGX-202ENST00000489074 768 ntBASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 SPTSSB-204ENST00000617024 1292 ntBASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AF228730.6-201ENST00000641497 218 ntBASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AC084121.3-201ENST00000641716 218 ntBASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 AC105233.6-201ENST00000642093 218 ntBASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DCLRE1AQ6PJP8 FOXO1B-201ENST00000504678 1527 ntBASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 AC005034.1-201ENST00000426657 489 ntBASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 BASP1P1-201ENST00000430708 665 ntBASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 AL035252.4-201ENST00000624174 288 ntBASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 AL512652.2-201ENST00000625156 1716 ntBASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DCLRE1AQ6PJP8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DCLRE1AQ6PJP8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DCLRE1AQ6PJP8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.71■□□□□ 0.43
DCLRE1AQ6PJP8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DCLRE1AQ6PJP8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
DCLRE1AQ6PJP8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms