Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 PMS2P1-201ENST00000431037 1228 ntBASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 AC005412.3-201ENST00000580309 715 ntBASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 AC132872.4-202ENST00000622924 2756 ntBASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 TOP3BP1-201ENST00000420768 1380 ntBASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 AC099063.4-201ENST00000641099 1602 ntBASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NIPAL1Q6NVV3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 RNA5SP416-201ENST00000516838 111 ntBASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 KRT18P58-201ENST00000527480 1120 ntBASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AC091167.2-201ENST00000579581 588 ntBASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 AC002310.6-201ENST00000624451 1377 ntBASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 KRT8P49-201ENST00000604166 1432 ntBASIC16.11■□□□□ 0.17
NIPAL1Q6NVV3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NIPAL1Q6NVV3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
NIPAL1Q6NVV3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL1Q6NVV3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL1Q6NVV3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL1Q6NVV3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms