Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 AKAP8P1-201ENST00000434743 1349 ntBASIC15.04■□□□□ -0
RTL6Q6ICC9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 FAM58DP-201ENST00000428076 619 ntBASIC15.04■□□□□ -0
RTL6Q6ICC9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.04■□□□□ -0
RTL6Q6ICC9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 RN7SL589P-201ENST00000481268 310 ntBASIC15.04■□□□□ -0
RTL6Q6ICC9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.04■□□□□ -0
RTL6Q6ICC9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.04■□□□□ -0
RTL6Q6ICC9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RTL6Q6ICC9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.04■□□□□ -0
RTL6Q6ICC9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.04■□□□□ -0
RTL6Q6ICC9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.04■□□□□ -0
RTL6Q6ICC9 MIR3197-201ENST00000582241 73 ntBASIC15.04■□□□□ -0
RTL6Q6ICC9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.04■□□□□ -0
RTL6Q6ICC9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.04■□□□□ -0
RTL6Q6ICC9 AL161645.1-201ENST00000622716 1255 ntBASIC15.04■□□□□ -0
RTL6Q6ICC9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 AL139384.1-201ENST00000612143 3047 ntBASIC15.04■□□□□ -0
RTL6Q6ICC9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.04■□□□□ -0
RTL6Q6ICC9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.04■□□□□ -0
RTL6Q6ICC9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL6Q6ICC9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RTL6Q6ICC9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.03■□□□□ -0
RTL6Q6ICC9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.03■□□□□ -0
RTL6Q6ICC9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.03■□□□□ -0
RTL6Q6ICC9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 AC069335.1-201ENST00000489972 472 ntBASIC15.03■□□□□ -0
RTL6Q6ICC9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RTL6Q6ICC9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.03■□□□□ -0
RTL6Q6ICC9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.03■□□□□ -0
RTL6Q6ICC9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 AC008894.3-201ENST00000624324 3103 ntBASIC15.03■□□□□ -0
RTL6Q6ICC9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RTL6Q6ICC9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
RTL6Q6ICC9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.03■□□□□ -0
RTL6Q6ICC9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL6Q6ICC9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.02■□□□□ -0
RTL6Q6ICC9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.02■□□□□ -0
RTL6Q6ICC9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.02■□□□□ -0
RTL6Q6ICC9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.02■□□□□ -0
RTL6Q6ICC9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RTL6Q6ICC9 TOP3BP1-201ENST00000420768 1380 ntBASIC15.02■□□□□ -0
RTL6Q6ICC9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
RTL6Q6ICC9 AL118508.1-201ENST00000613502 2345 ntBASIC15.02■□□□□ -0
RTL6Q6ICC9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL6Q6ICC9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.02■□□□□ -0
RTL6Q6ICC9 AC092474.2-201ENST00000424288 719 ntBASIC15.02■□□□□ -0
RTL6Q6ICC9 FAM8A3P-201ENST00000427218 844 ntBASIC15.02■□□□□ -0
RTL6Q6ICC9 SPCS2P4-201ENST00000436160 681 ntBASIC15.02■□□□□ -0
RTL6Q6ICC9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms