Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KHDC1Q4VXA5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 TSPY26P-202ENST00000565928 3884 ntBASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 FRMD8P1-201ENST00000440433 1524 ntBASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 OR6D1P-203ENST00000641209 4860 ntBASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KHDC1Q4VXA5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KHDC1Q4VXA5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 AC087163.2-201ENST00000457299 853 ntBASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KHDC1Q4VXA5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms