Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX4P78413 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX4P78413 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.4■□□□□ 0.38
IRX4P78413 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX4P78413 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX4P78413 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX4P78413 AC004790.2-201ENST00000623588 572 ntBASIC17.4■□□□□ 0.38
IRX4P78413 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
IRX4P78413 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX4P78413 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX4P78413 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
IRX4P78413 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX4P78413 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.39■□□□□ 0.38
IRX4P78413 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
IRX4P78413 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IRX4P78413 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
IRX4P78413 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
IRX4P78413 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
IRX4P78413 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IRX4P78413 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
IRX4P78413 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX4P78413 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IRX4P78413 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX4P78413 PRSS29P-201ENST00000440800 595 ntBASIC17.39■□□□□ 0.37
IRX4P78413 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.39■□□□□ 0.37
IRX4P78413 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
IRX4P78413 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.39■□□□□ 0.37
IRX4P78413 AL031432.2-201ENST00000566714 459 ntBASIC17.39■□□□□ 0.37
IRX4P78413 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.39■□□□□ 0.37
IRX4P78413 AL928711.1-201ENST00000570165 459 ntBASIC17.39■□□□□ 0.37
IRX4P78413 AC027612.4-201ENST00000605371 583 ntBASIC17.39■□□□□ 0.37
IRX4P78413 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX4P78413 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX4P78413 AC092053.1-201ENST00000605787 1936 ntBASIC17.39■□□□□ 0.37
IRX4P78413 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 AC116353.5-201ENST00000638148 1699 ntBASIC17.39■□□□□ 0.37
IRX4P78413 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IRX4P78413 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX4P78413 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
IRX4P78413 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
IRX4P78413 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
IRX4P78413 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.38■□□□□ 0.37
IRX4P78413 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IRX4P78413 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.38■□□□□ 0.37
IRX4P78413 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IRX4P78413 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 AL020989.1-201ENST00000422979 469 ntBASIC17.38■□□□□ 0.37
IRX4P78413 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX4P78413 IGHV3-65-201ENST00000523210 341 ntBASIC17.38■□□□□ 0.37
IRX4P78413 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.38■□□□□ 0.37
IRX4P78413 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.38■□□□□ 0.37
IRX4P78413 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.38■□□□□ 0.37
IRX4P78413 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IRX4P78413 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.38■□□□□ 0.37
IRX4P78413 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
IRX4P78413 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.38■□□□□ 0.37
IRX4P78413 AC093028.1-201ENST00000622998 982 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms