Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.86■□□□□ 0.13
GFERP55789 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GFERP55789 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
GFERP55789 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
GFERP55789 BASP1P1-201ENST00000430708 665 ntBASIC15.86■□□□□ 0.13
GFERP55789 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.86■□□□□ 0.13
GFERP55789 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.86■□□□□ 0.13
GFERP55789 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.86■□□□□ 0.13
GFERP55789 AC003101.2-201ENST00000612557 442 ntBASIC15.86■□□□□ 0.13
GFERP55789 AL139011.1-202ENST00000642063 584 ntBASIC15.86■□□□□ 0.13
GFERP55789 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GFERP55789 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
GFERP55789 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFERP55789 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.85■□□□□ 0.13
GFERP55789 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.85■□□□□ 0.13
GFERP55789 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
GFERP55789 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
GFERP55789 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GFERP55789 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.85■□□□□ 0.13
GFERP55789 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 INGX-202ENST00000489074 768 ntBASIC15.85■□□□□ 0.13
GFERP55789 RNA5SP421-201ENST00000516864 134 ntBASIC15.85■□□□□ 0.13
GFERP55789 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 MIR4745-201ENST00000577608 62 ntBASIC15.85■□□□□ 0.13
GFERP55789 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.85■□□□□ 0.13
GFERP55789 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.85■□□□□ 0.13
GFERP55789 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GFERP55789 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
GFERP55789 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GFERP55789 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 AL031731.1-201ENST00000642131 2094 ntBASIC15.84■□□□□ 0.13
GFERP55789 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.84■□□□□ 0.13
GFERP55789 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.84■□□□□ 0.13
GFERP55789 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 HLA-H-201ENST00000383620 1096 ntBASIC15.84■□□□□ 0.13
GFERP55789 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.84■□□□□ 0.13
GFERP55789 AC092580.3-201ENST00000430932 139 ntBASIC15.84■□□□□ 0.13
GFERP55789 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.84■□□□□ 0.13
GFERP55789 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 AC097493.3-201ENST00000509725 367 ntBASIC15.84■□□□□ 0.13
GFERP55789 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.84■□□□□ 0.13
GFERP55789 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.84■□□□□ 0.13
GFERP55789 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.84■□□□□ 0.13
GFERP55789 AL158211.3-201ENST00000607385 239 ntBASIC15.84■□□□□ 0.13
GFERP55789 SPTSSB-204ENST00000617024 1292 ntBASIC15.84■□□□□ 0.13
GFERP55789 AJ011932.1-201ENST00000621707 465 ntBASIC15.84■□□□□ 0.13
GFERP55789 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 AC105020.1-201ENST00000435356 2205 ntBASIC15.84■□□□□ 0.13
GFERP55789 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFERP55789 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms