Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17■□□□□ 0.31
CDH4P55283 LINC01225-203ENST00000563550 1244 ntBASIC17■□□□□ 0.31
CDH4P55283 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17■□□□□ 0.31
CDH4P55283 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17■□□□□ 0.31
CDH4P55283 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17■□□□□ 0.31
CDH4P55283 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17■□□□□ 0.31
CDH4P55283 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17■□□□□ 0.31
CDH4P55283 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17■□□□□ 0.31
CDH4P55283 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CDH4P55283 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDH4P55283 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH4P55283 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH4P55283 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH4P55283 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CDH4P55283 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 AC005237.2-201ENST00000434368 219 ntBASIC16.99■□□□□ 0.31
CDH4P55283 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH4P55283 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.99■□□□□ 0.31
CDH4P55283 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH4P55283 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.99■□□□□ 0.31
CDH4P55283 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 AC027307.2-201ENST00000591252 911 ntBASIC16.99■□□□□ 0.31
CDH4P55283 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH4P55283 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.99■□□□□ 0.31
CDH4P55283 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDH4P55283 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH4P55283 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH4P55283 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH4P55283 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDH4P55283 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH4P55283 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH4P55283 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH4P55283 AL627223.1-201ENST00000416693 442 ntBASIC16.98■□□□□ 0.31
CDH4P55283 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH4P55283 AC069335.1-201ENST00000489972 472 ntBASIC16.98■□□□□ 0.31
CDH4P55283 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH4P55283 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
CDH4P55283 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH4P55283 AC027612.4-201ENST00000605371 583 ntBASIC16.98■□□□□ 0.31
CDH4P55283 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDH4P55283 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CDH4P55283 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH4P55283 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH4P55283 LTB4R2-202ENST00000528054 3092 ntBASIC16.98■□□□□ 0.31
CDH4P55283 GGT3P-204ENST00000453783 1664 ntBASIC16.97■□□□□ 0.31
CDH4P55283 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms