Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 DNAJB3-202ENST00000449667 1266 ntBASIC18.78■□□□□ 0.6
USP11P51784 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
USP11P51784 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.78■□□□□ 0.6
USP11P51784 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.78■□□□□ 0.6
USP11P51784 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP11P51784 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP11P51784 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USP11P51784 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.78■□□□□ 0.6
USP11P51784 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
USP11P51784 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP11P51784 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 PCGF3-213ENST00000620529 1899 ntBASIC18.77■□□□□ 0.6
USP11P51784 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.77■□□□□ 0.6
USP11P51784 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
USP11P51784 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.77■□□□□ 0.6
USP11P51784 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.77■□□□□ 0.6
USP11P51784 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.77■□□□□ 0.6
USP11P51784 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.77■□□□□ 0.6
USP11P51784 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.77■□□□□ 0.6
USP11P51784 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.77■□□□□ 0.6
USP11P51784 AL592309.1-201ENST00000443127 649 ntBASIC18.77■□□□□ 0.6
USP11P51784 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.77■□□□□ 0.6
USP11P51784 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 AL138918.1-201ENST00000568306 659 ntBASIC18.77■□□□□ 0.6
USP11P51784 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.77■□□□□ 0.6
USP11P51784 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP11P51784 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
USP11P51784 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.77■□□□□ 0.6
USP11P51784 AC073389.1-201ENST00000595595 795 ntBASIC18.77■□□□□ 0.6
USP11P51784 AP001160.2-201ENST00000596071 487 ntBASIC18.77■□□□□ 0.6
USP11P51784 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.77■□□□□ 0.6
USP11P51784 AC004835.2-201ENST00000603762 682 ntBASIC18.77■□□□□ 0.6
USP11P51784 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.77■□□□□ 0.6
USP11P51784 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.77■□□□□ 0.6
USP11P51784 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
USP11P51784 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
USP11P51784 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP11P51784 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP11P51784 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
USP11P51784 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.77■□□□□ 0.59
USP11P51784 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP11P51784 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
USP11P51784 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.76■□□□□ 0.59
USP11P51784 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP11P51784 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP11P51784 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
USP11P51784 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 AC092171.3-201ENST00000610122 2651 ntBASIC18.76■□□□□ 0.59
USP11P51784 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.76■□□□□ 0.59
USP11P51784 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
USP11P51784 MIR346-201ENST00000362234 95 ntBASIC18.76■□□□□ 0.59
USP11P51784 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
USP11P51784 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.76■□□□□ 0.59
USP11P51784 CNN2P11-201ENST00000429351 262 ntBASIC18.76■□□□□ 0.59
USP11P51784 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.76■□□□□ 0.59
USP11P51784 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.76■□□□□ 0.59
USP11P51784 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.76■□□□□ 0.59
USP11P51784 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP11P51784 SNHG9-202ENST00000564014 471 ntBASIC18.76■□□□□ 0.59
USP11P51784 AC027307.2-201ENST00000591252 911 ntBASIC18.76■□□□□ 0.59
USP11P51784 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms