Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.24□□□□□ -0.29
CDC34P49427 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.24□□□□□ -0.29
CDC34P49427 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC34P49427 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC34P49427 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC34P49427 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDC34P49427 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 KRT8P10-201ENST00000450021 1447 ntBASIC13.23□□□□□ -0.29
CDC34P49427 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CDC34P49427 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC34P49427 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 AC002310.6-201ENST00000624451 1377 ntBASIC13.23□□□□□ -0.29
CDC34P49427 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC34P49427 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 AC073347.1-201ENST00000421633 2643 ntBASIC13.23□□□□□ -0.29
CDC34P49427 AC022532.1-201ENST00000624563 1728 ntBASIC13.23□□□□□ -0.29
CDC34P49427 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDC34P49427 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 FAM201B-201ENST00000458407 597 ntBASIC13.23□□□□□ -0.29
CDC34P49427 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC34P49427 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 Z99916.2-201ENST00000604037 246 ntBASIC13.23□□□□□ -0.29
CDC34P49427 ITM2C-210ENST00000620962 501 ntBASIC13.23□□□□□ -0.29
CDC34P49427 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 OR2I1P-210ENST00000642037 4691 ntBASIC13.23□□□□□ -0.29
CDC34P49427 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 SBF1P1-201ENST00000444527 5631 ntBASIC13.23□□□□□ -0.29
CDC34P49427 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDC34P49427 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDC34P49427 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.23□□□□□ -0.29
CDC34P49427 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.22□□□□□ -0.29
CDC34P49427 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CDC34P49427 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.22□□□□□ -0.29
CDC34P49427 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 NAPSB-206ENST00000562112 1266 ntBASIC13.22□□□□□ -0.29
CDC34P49427 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 AC073912.3-201ENST00000624414 853 ntBASIC13.22□□□□□ -0.29
CDC34P49427 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CDC34P49427 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms