Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC11.27□□□□□ -0.61
PCP4P48539 DNAJB5-210ENST00000545841 3068 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC11.27□□□□□ -0.61
PCP4P48539 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.27□□□□□ -0.61
PCP4P48539 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC11.27□□□□□ -0.61
PCP4P48539 PCDHA6-201ENST00000378126 3267 ntBASIC11.27□□□□□ -0.61
PCP4P48539 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC11.27□□□□□ -0.61
PCP4P48539 AL445647.1-201ENST00000606221 3599 ntBASIC11.27□□□□□ -0.61
PCP4P48539 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 AC003102.1-202ENST00000563394 1796 ntBASIC11.26□□□□□ -0.61
PCP4P48539 AC148477.4-201ENST00000613430 1793 ntBASIC11.26□□□□□ -0.61
PCP4P48539 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
PCP4P48539 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
PCP4P48539 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.26□□□□□ -0.61
PCP4P48539 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PCP4P48539 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 PEX7-203ENST00000541292 945 ntTSL 5 BASIC11.26□□□□□ -0.61
PCP4P48539 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PCP4P48539 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 TFIP11-203ENST00000407431 2974 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.26□□□□□ -0.61
PCP4P48539 STAC-204ENST00000457375 1366 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PCP4P48539 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PCP4P48539 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
PCP4P48539 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC11.25□□□□□ -0.61
PCP4P48539 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
PCP4P48539 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 MIR219A2-201ENST00000608502 1504 ntBASIC11.25□□□□□ -0.61
PCP4P48539 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
PCP4P48539 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.25□□□□□ -0.61
PCP4P48539 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 AC132938.6-201ENST00000623828 1655 ntBASIC11.25□□□□□ -0.61
PCP4P48539 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC11.25□□□□□ -0.61
PCP4P48539 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.25□□□□□ -0.61
PCP4P48539 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 AL603832.2-201ENST00000566195 2125 ntBASIC11.25□□□□□ -0.61
PCP4P48539 AC083906.6-201ENST00000641366 219 ntBASIC11.25□□□□□ -0.61
PCP4P48539 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PCP4P48539 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms