Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.27■□□□□ 0.2
EPHA3P29320 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EPHA3P29320 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.27■□□□□ 0.2
EPHA3P29320 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
EPHA3P29320 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.27■□□□□ 0.2
EPHA3P29320 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.27■□□□□ 0.2
EPHA3P29320 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.27■□□□□ 0.2
EPHA3P29320 LINC01023-201ENST00000606054 436 ntBASIC16.27■□□□□ 0.2
EPHA3P29320 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
EPHA3P29320 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.27■□□□□ 0.2
EPHA3P29320 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
EPHA3P29320 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 AL512652.2-201ENST00000625156 1716 ntBASIC16.27■□□□□ 0.19
EPHA3P29320 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
EPHA3P29320 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
EPHA3P29320 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
EPHA3P29320 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.27■□□□□ 0.19
EPHA3P29320 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.27■□□□□ 0.19
EPHA3P29320 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA3P29320 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHA3P29320 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 AC005332.1-201ENST00000577698 1310 ntBASIC16.26■□□□□ 0.19
EPHA3P29320 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
EPHA3P29320 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
EPHA3P29320 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
EPHA3P29320 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 TOB2P1-201ENST00000469761 992 ntBASIC16.26■□□□□ 0.19
EPHA3P29320 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 TPSP2-201ENST00000561760 610 ntBASIC16.26■□□□□ 0.19
EPHA3P29320 RN7SL850P-201ENST00000579959 291 ntBASIC16.26■□□□□ 0.19
EPHA3P29320 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 AC114341.1-201ENST00000618070 349 ntBASIC16.26■□□□□ 0.19
EPHA3P29320 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 AC073592.4-201ENST00000623827 446 ntBASIC16.26■□□□□ 0.19
EPHA3P29320 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 AL031731.1-201ENST00000642131 2094 ntBASIC16.26■□□□□ 0.19
EPHA3P29320 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA3P29320 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPHA3P29320 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA3P29320 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
EPHA3P29320 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
EPHA3P29320 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHA3P29320 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 AL136379.1-201ENST00000623471 2642 ntBASIC16.25■□□□□ 0.19
EPHA3P29320 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
EPHA3P29320 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.25■□□□□ 0.19
EPHA3P29320 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA3P29320 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 IGHV3-47-201ENST00000425060 335 ntBASIC16.25■□□□□ 0.19
EPHA3P29320 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPHA3P29320 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms