Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
ATF1P18846 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
ATF1P18846 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.68□□□□□ -0.06
ATF1P18846 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
ATF1P18846 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.68□□□□□ -0.06
ATF1P18846 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.68□□□□□ -0.06
ATF1P18846 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ATF1P18846 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ATF1P18846 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ATF1P18846 MIR3180-1-201ENST00000580374 94 ntBASIC14.68□□□□□ -0.06
ATF1P18846 MIR3180-3-201ENST00000584616 94 ntBASIC14.68□□□□□ -0.06
ATF1P18846 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ATF1P18846 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
ATF1P18846 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ATF1P18846 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ATF1P18846 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ATF1P18846 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.68□□□□□ -0.06
ATF1P18846 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATF1P18846 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.68□□□□□ -0.06
ATF1P18846 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.67□□□□□ -0.06
ATF1P18846 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 SIGLEC16-201ENST00000599858 1437 ntBASIC14.67□□□□□ -0.06
ATF1P18846 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ATF1P18846 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
ATF1P18846 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 LINC00982-205ENST00000420957 435 ntBASIC14.67□□□□□ -0.06
ATF1P18846 ABCD1P5-201ENST00000445663 754 ntBASIC14.67□□□□□ -0.06
ATF1P18846 FAM210CP-201ENST00000445714 574 ntBASIC14.67□□□□□ -0.06
ATF1P18846 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.67□□□□□ -0.06
ATF1P18846 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.67□□□□□ -0.06
ATF1P18846 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.67□□□□□ -0.06
ATF1P18846 AP000550.4-202ENST00000639755 178 ntBASIC14.67□□□□□ -0.06
ATF1P18846 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ATF1P18846 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATF1P18846 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.67□□□□□ -0.06
ATF1P18846 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms