Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.48■□□□□ 0.39
RB1P06400 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RB1P06400 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RB1P06400 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.48■□□□□ 0.39
RB1P06400 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.48■□□□□ 0.39
RB1P06400 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.48■□□□□ 0.39
RB1P06400 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.48■□□□□ 0.39
RB1P06400 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.48■□□□□ 0.39
RB1P06400 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 MIR6069-201ENST00000620069 79 ntBASIC17.48■□□□□ 0.39
RB1P06400 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
RB1P06400 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.48■□□□□ 0.39
RB1P06400 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.48■□□□□ 0.39
RB1P06400 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RB1P06400 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RB1P06400 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.48■□□□□ 0.39
RB1P06400 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RB1P06400 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.48■□□□□ 0.39
RB1P06400 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.48■□□□□ 0.39
RB1P06400 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RB1P06400 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.47■□□□□ 0.39
RB1P06400 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
RB1P06400 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.47■□□□□ 0.39
RB1P06400 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.47■□□□□ 0.39
RB1P06400 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.47■□□□□ 0.39
RB1P06400 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RB1P06400 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.47■□□□□ 0.39
RB1P06400 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.47■□□□□ 0.39
RB1P06400 AP005482.1-201ENST00000563722 1273 ntBASIC17.47■□□□□ 0.39
RB1P06400 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
RB1P06400 AL512343.1-201ENST00000605837 169 ntBASIC17.47■□□□□ 0.39
RB1P06400 AC004461.2-201ENST00000629517 803 ntBASIC17.47■□□□□ 0.39
RB1P06400 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RB1P06400 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RB1P06400 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 AC007613.1-201ENST00000572811 2597 ntBASIC17.46■□□□□ 0.39
RB1P06400 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.46■□□□□ 0.39
RB1P06400 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.46■□□□□ 0.39
RB1P06400 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.46■□□□□ 0.39
RB1P06400 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.46■□□□□ 0.39
RB1P06400 AL671710.1-201ENST00000610245 2349 ntBASIC17.46■□□□□ 0.39
RB1P06400 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.46■□□□□ 0.39
RB1P06400 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.46■□□□□ 0.39
RB1P06400 AC123567.1-201ENST00000548294 1261 ntBASIC17.46■□□□□ 0.39
RB1P06400 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
RB1P06400 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.46■□□□□ 0.39
RB1P06400 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.46■□□□□ 0.39
RB1P06400 AC093726.1-201ENST00000608064 963 ntBASIC17.46■□□□□ 0.39
RB1P06400 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 NOC2LP2-201ENST00000407594 1944 ntBASIC17.46■□□□□ 0.39
RB1P06400 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RB1P06400 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.46■□□□□ 0.39
RB1P06400 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RB1P06400 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RB1P06400 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
RB1P06400 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RB1P06400 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms