Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LTAP01374 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.59□□□□□ -0.39
LTAP01374 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.59□□□□□ -0.39
LTAP01374 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.59□□□□□ -0.39
LTAP01374 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.59□□□□□ -0.39
LTAP01374 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.59□□□□□ -0.39
LTAP01374 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 AC090616.6-201ENST00000582640 721 ntBASIC12.59□□□□□ -0.39
LTAP01374 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.59□□□□□ -0.39
LTAP01374 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LTAP01374 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.59□□□□□ -0.39
LTAP01374 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.59□□□□□ -0.39
LTAP01374 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.59□□□□□ -0.39
LTAP01374 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.59□□□□□ -0.39
LTAP01374 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LTAP01374 AC148477.5-201ENST00000625164 1645 ntBASIC12.59□□□□□ -0.39
LTAP01374 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
LTAP01374 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
LTAP01374 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LTAP01374 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LTAP01374 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.58□□□□□ -0.4
LTAP01374 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 AL020989.1-201ENST00000422979 469 ntBASIC12.58□□□□□ -0.4
LTAP01374 TSPY22P-201ENST00000427496 604 ntBASIC12.58□□□□□ -0.4
LTAP01374 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.58□□□□□ -0.4
LTAP01374 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 PMPCAP1-201ENST00000508114 1576 ntBASIC12.58□□□□□ -0.4
LTAP01374 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.58□□□□□ -0.4
LTAP01374 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 REXO1L8P-201ENST00000604378 1897 ntBASIC12.58□□□□□ -0.4
LTAP01374 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.58□□□□□ -0.4
LTAP01374 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LTAP01374 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LTAP01374 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LTAP01374 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 AC243591.1-201ENST00000452967 1364 ntBASIC12.57□□□□□ -0.4
LTAP01374 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LTAP01374 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LTAP01374 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms