Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GMDSO60547 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GMDSO60547 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.83□□□□□ -0.03
GMDSO60547 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
GMDSO60547 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GMDSO60547 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GMDSO60547 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.83□□□□□ -0.04
GMDSO60547 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 DBET-201ENST00000630918 3363 ntBASIC14.83□□□□□ -0.04
GMDSO60547 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.83□□□□□ -0.04
GMDSO60547 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GMDSO60547 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.83□□□□□ -0.04
GMDSO60547 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.83□□□□□ -0.04
GMDSO60547 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.83□□□□□ -0.04
GMDSO60547 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.83□□□□□ -0.04
GMDSO60547 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.83□□□□□ -0.04
GMDSO60547 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.83□□□□□ -0.04
GMDSO60547 AC073592.4-201ENST00000623827 446 ntBASIC14.83□□□□□ -0.04
GMDSO60547 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.83□□□□□ -0.04
GMDSO60547 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
GMDSO60547 AC079776.2-201ENST00000641154 1609 ntBASIC14.83□□□□□ -0.04
GMDSO60547 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.83□□□□□ -0.04
GMDSO60547 AL365203.3-201ENST00000609742 2057 ntBASIC14.83□□□□□ -0.04
GMDSO60547 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
GMDSO60547 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
GMDSO60547 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GMDSO60547 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
GMDSO60547 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GMDSO60547 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.82□□□□□ -0.04
GMDSO60547 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.82□□□□□ -0.04
GMDSO60547 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.82□□□□□ -0.04
GMDSO60547 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GMDSO60547 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.82□□□□□ -0.04
GMDSO60547 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.82□□□□□ -0.04
GMDSO60547 AP001269.4-201ENST00000609611 512 ntBASIC14.82□□□□□ -0.04
GMDSO60547 AL732292.2-201ENST00000609649 430 ntBASIC14.82□□□□□ -0.04
GMDSO60547 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.82□□□□□ -0.04
GMDSO60547 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.82□□□□□ -0.04
GMDSO60547 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GMDSO60547 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.82□□□□□ -0.04
GMDSO60547 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GMDSO60547 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GMDSO60547 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GMDSO60547 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GMDSO60547 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms