Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CCDC66A2RUB6 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.14■□□□□ 0.49
CCDC66A2RUB6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 MIR600HG-201ENST00000449175 5984 ntBASIC18.14■□□□□ 0.49
CCDC66A2RUB6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 KRT8P26-201ENST00000534154 1276 ntBASIC18.14■□□□□ 0.49
CCDC66A2RUB6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 AL136038.3-201ENST00000561909 1096 ntBASIC18.14■□□□□ 0.49
CCDC66A2RUB6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC66A2RUB6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC138035.3-201ENST00000622706 2791 ntBASIC18.13■□□□□ 0.49
CCDC66A2RUB6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC009336.1-201ENST00000608941 1553 ntBASIC18.13■□□□□ 0.49
CCDC66A2RUB6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC009533.2-201ENST00000543664 586 ntBASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC66A2RUB6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC66A2RUB6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms