Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.05■□□□□ 0.64
CLIC4Q9Y696 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 AC104692.2-201ENST00000603054 253 ntBASIC19.04■□□□□ 0.64
CLIC4Q9Y696 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 AC005593.1-201ENST00000624894 515 ntBASIC19.04■□□□□ 0.64
CLIC4Q9Y696 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 OR6D1P-203ENST00000641209 4860 ntBASIC19.04■□□□□ 0.64
CLIC4Q9Y696 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC4Q9Y696 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 AC092910.1-201ENST00000482027 1129 ntBASIC19.03■□□□□ 0.64
CLIC4Q9Y696 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 ACTL9-202ENST00000612068 1252 ntBASIC19.03■□□□□ 0.64
CLIC4Q9Y696 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 PCGF3-213ENST00000620529 1899 ntBASIC19.03■□□□□ 0.64
CLIC4Q9Y696 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC4Q9Y696 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 MRPL20P1-201ENST00000400819 433 ntBASIC19.02■□□□□ 0.64
CLIC4Q9Y696 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.02■□□□□ 0.64
CLIC4Q9Y696 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 MIR7706-201ENST00000613747 67 ntBASIC19.02■□□□□ 0.64
CLIC4Q9Y696 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms