Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 FAM8A6P-201ENST00000407496 1135 ntBASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 AC073912.3-201ENST00000624414 853 ntBASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 AL353593.2-201ENST00000602529 1483 ntBASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RCL1Q9Y2P8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 MIR662-201ENST00000384847 95 ntBASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RCL1Q9Y2P8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RCL1Q9Y2P8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms