Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 TSPY26P-202ENST00000565928 3884 ntBASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 GGT4P-201ENST00000623672 1708 ntBASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 MIR5100-201ENST00000579544 119 ntBASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC42SE2Q9NRR3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 KRT8P39-201ENST00000396270 1433 ntBASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 NCF1C-201ENST00000438382 1427 ntBASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 AC006449.6-201ENST00000612330 2296 ntBASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CDC42SE2Q9NRR3 SNX33P1-201ENST00000592116 1762 ntBASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.52□□□□□ -0.57
CDC42SE2Q9NRR3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms